Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh5Q9QUM7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Msh5Q9QUM7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.86■■□□□ 1.09
Msh5Q9QUM7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh5Q9QUM7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh5Q9QUM7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh5Q9QUM7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Gm27502-201ENSMUST00000183495 199 ntBASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh5Q9QUM7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.83■■□□□ 1.09
Msh5Q9QUM7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Msh5Q9QUM7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh5Q9QUM7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh5Q9QUM7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Msh5Q9QUM7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.82■■□□□ 1.08
Msh5Q9QUM7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Msh5Q9QUM7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Msh5Q9QUM7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh5Q9QUM7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh5Q9QUM7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh5Q9QUM7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh5Q9QUM7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh5Q9QUM7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh5Q9QUM7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh5Q9QUM7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh5Q9QUM7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh5Q9QUM7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh5Q9QUM7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh5Q9QUM7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh5Q9QUM7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh5Q9QUM7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Msh5Q9QUM7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh5Q9QUM7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh5Q9QUM7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Msh5Q9QUM7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh5Q9QUM7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh5Q9QUM7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Msh5Q9QUM7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.73■■□□□ 1.07
Msh5Q9QUM7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
Msh5Q9QUM7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms