Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rcl1Q9JJT0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rcl1Q9JJT0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rcl1Q9JJT0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Gm9806-201ENSMUST00000051080 552 ntBASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.08■□□□□ 0.48
Rcl1Q9JJT0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Gm11687-201ENSMUST00000118911 886 ntBASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.07■□□□□ 0.48
Rcl1Q9JJT0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rcl1Q9JJT0 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Gm9812-201ENSMUST00000061934 968 ntBASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rcl1Q9JJT0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 Notumos-201ENSMUST00000151998 2659 ntBASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rcl1Q9JJT0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Gm16437-201ENSMUST00000025669 507 ntBASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rcl1Q9JJT0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rcl1Q9JJT0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Rcl1Q9JJT0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rcl1Q9JJT0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rcl1Q9JJT0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rcl1Q9JJT0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18■□□□□ 0.47
Rcl1Q9JJT0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Rcl1Q9JJT0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rcl1Q9JJT0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18■□□□□ 0.47
Rcl1Q9JJT0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Rcl1Q9JJT0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rcl1Q9JJT0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rcl1Q9JJT0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms