Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim39Q9ESN2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim39Q9ESN2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Trim39Q9ESN2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Trim39Q9ESN2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim39Q9ESN2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim39Q9ESN2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim39Q9ESN2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim39Q9ESN2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim39Q9ESN2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim39Q9ESN2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim39Q9ESN2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim39Q9ESN2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim39Q9ESN2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim39Q9ESN2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
Trim39Q9ESN2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Gm11175-201ENSMUST00000116172 543 ntBASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim39Q9ESN2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim39Q9ESN2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim39Q9ESN2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim39Q9ESN2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim39Q9ESN2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim39Q9ESN2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim39Q9ESN2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim39Q9ESN2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim39Q9ESN2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim39Q9ESN2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim39Q9ESN2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim39Q9ESN2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim39Q9ESN2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim39Q9ESN2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.89■□□□□ 0.77
Trim39Q9ESN2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim39Q9ESN2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim39Q9ESN2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim39Q9ESN2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim39Q9ESN2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim39Q9ESN2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Gm44428-201ENSMUST00000204474 874 ntBASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim39Q9ESN2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.86■□□□□ 0.77
Trim39Q9ESN2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim39Q9ESN2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim39Q9ESN2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim39Q9ESN2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim39Q9ESN2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim39Q9ESN2 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.83■□□□□ 0.77
Trim39Q9ESN2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.83■□□□□ 0.77
Trim39Q9ESN2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Trim39Q9ESN2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim39Q9ESN2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim39Q9ESN2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim39Q9ESN2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim39Q9ESN2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms