Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tubb3Q9ERD7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tubb3Q9ERD7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Tubb3Q9ERD7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.45■■□□□ 1.02
Tubb3Q9ERD7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tubb3Q9ERD7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tubb3Q9ERD7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tubb3Q9ERD7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tubb3Q9ERD7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tubb3Q9ERD7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tubb3Q9ERD7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Tubb3Q9ERD7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Tubb3Q9ERD7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.42■■□□□ 1.02
Tubb3Q9ERD7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tubb3Q9ERD7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tubb3Q9ERD7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tubb3Q9ERD7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tubb3Q9ERD7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tubb3Q9ERD7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tubb3Q9ERD7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tubb3Q9ERD7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tubb3Q9ERD7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Tubb3Q9ERD7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tubb3Q9ERD7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tubb3Q9ERD7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
Tubb3Q9ERD7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Tubb3Q9ERD7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tubb3Q9ERD7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tubb3Q9ERD7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tubb3Q9ERD7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tubb3Q9ERD7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.37■■□□□ 1.01
Tubb3Q9ERD7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.37■■□□□ 1.01
Tubb3Q9ERD7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tubb3Q9ERD7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Tubb3Q9ERD7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.36■■□□□ 1.01
Tubb3Q9ERD7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tubb3Q9ERD7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubb3Q9ERD7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.33■■□□□ 1.01
Tubb3Q9ERD7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.33■■□□□ 1.01
Tubb3Q9ERD7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Tubb3Q9ERD7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Tubb3Q9ERD7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubb3Q9ERD7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tubb3Q9ERD7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.32■■□□□ 1
Tubb3Q9ERD7 Gm22567-201ENSMUST00000175542 342 ntBASIC21.32■■□□□ 1
Tubb3Q9ERD7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubb3Q9ERD7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.32■■□□□ 1
Tubb3Q9ERD7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.32■■□□□ 1
Tubb3Q9ERD7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tubb3Q9ERD7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms