Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r40Q9EQ46 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r40Q9EQ46 Gm14117-201ENSMUST00000122417 843 ntBASIC20.52■□□□□ 0.88
Vmn1r40Q9EQ46 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.52■□□□□ 0.88
Vmn1r40Q9EQ46 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Vmn1r40Q9EQ46 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r40Q9EQ46 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r40Q9EQ46 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.51■□□□□ 0.87
Vmn1r40Q9EQ46 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r40Q9EQ46 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vmn1r40Q9EQ46 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r40Q9EQ46 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r40Q9EQ46 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r40Q9EQ46 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r40Q9EQ46 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r40Q9EQ46 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.49■□□□□ 0.87
Vmn1r40Q9EQ46 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r40Q9EQ46 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r40Q9EQ46 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.48■□□□□ 0.87
Vmn1r40Q9EQ46 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.48■□□□□ 0.87
Vmn1r40Q9EQ46 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r40Q9EQ46 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r40Q9EQ46 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Etf1-202ENSMUST00000180351 108 ntBASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r40Q9EQ46 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r40Q9EQ46 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Vmn1r40Q9EQ46 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r40Q9EQ46 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Vmn1r40Q9EQ46 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Vmn1r40Q9EQ46 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r40Q9EQ46 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.43■□□□□ 0.86
Vmn1r40Q9EQ46 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r40Q9EQ46 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r40Q9EQ46 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r40Q9EQ46 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r40Q9EQ46 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r40Q9EQ46 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.4■□□□□ 0.86
Vmn1r40Q9EQ46 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r40Q9EQ46 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.4■□□□□ 0.86
Vmn1r40Q9EQ46 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r40Q9EQ46 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r40Q9EQ46 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Vmn1r40Q9EQ46 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vmn1r40Q9EQ46 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vmn1r40Q9EQ46 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r40Q9EQ46 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Vmn1r40Q9EQ46 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r40Q9EQ46 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r40Q9EQ46 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms