Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rrp8Q9DB85 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rrp8Q9DB85 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.29■■□□□ 1
Rrp8Q9DB85 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.29■■□□□ 1
Rrp8Q9DB85 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rrp8Q9DB85 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rrp8Q9DB85 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rrp8Q9DB85 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rrp8Q9DB85 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rrp8Q9DB85 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rrp8Q9DB85 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rrp8Q9DB85 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.27■■□□□ 1
Rrp8Q9DB85 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rrp8Q9DB85 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rrp8Q9DB85 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rrp8Q9DB85 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rrp8Q9DB85 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rrp8Q9DB85 Gm10399-202ENSMUST00000202768 748 ntBASIC21.26■□□□□ 0.99
Rrp8Q9DB85 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rrp8Q9DB85 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rrp8Q9DB85 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rrp8Q9DB85 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.25■□□□□ 0.99
Rrp8Q9DB85 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rrp8Q9DB85 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rrp8Q9DB85 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rrp8Q9DB85 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rrp8Q9DB85 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rrp8Q9DB85 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rrp8Q9DB85 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rrp8Q9DB85 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.24■□□□□ 0.99
Rrp8Q9DB85 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rrp8Q9DB85 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rrp8Q9DB85 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.22■□□□□ 0.99
Rrp8Q9DB85 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Rrp8Q9DB85 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rrp8Q9DB85 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rrp8Q9DB85 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rrp8Q9DB85 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rrp8Q9DB85 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rrp8Q9DB85 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.2■□□□□ 0.98
Rrp8Q9DB85 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rrp8Q9DB85 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rrp8Q9DB85 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rrp8Q9DB85 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Rrp8Q9DB85 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rrp8Q9DB85 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rrp8Q9DB85 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.19■□□□□ 0.98
Rrp8Q9DB85 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rrp8Q9DB85 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rrp8Q9DB85 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.18■□□□□ 0.98
Rrp8Q9DB85 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rrp8Q9DB85 Gm21956-201ENSMUST00000179946 522 ntBASIC21.18■□□□□ 0.98
Rrp8Q9DB85 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.18■□□□□ 0.98
Rrp8Q9DB85 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.18■□□□□ 0.98
Rrp8Q9DB85 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rrp8Q9DB85 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rrp8Q9DB85 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.18■□□□□ 0.98
Rrp8Q9DB85 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rrp8Q9DB85 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rrp8Q9DB85 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rrp8Q9DB85 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rrp8Q9DB85 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Gm12922-201ENSMUST00000120626 809 ntBASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rrp8Q9DB85 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rrp8Q9DB85 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rrp8Q9DB85 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rrp8Q9DB85 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rrp8Q9DB85 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms