Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph9Q9D9V4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph9Q9D9V4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rsph9Q9D9V4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph9Q9D9V4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.15■□□□□ 0.98
Rsph9Q9D9V4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rsph9Q9D9V4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rsph9Q9D9V4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rsph9Q9D9V4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rsph9Q9D9V4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Gm45102-201ENSMUST00000207427 857 ntBASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rsph9Q9D9V4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rsph9Q9D9V4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rsph9Q9D9V4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.12■□□□□ 0.97
Rsph9Q9D9V4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Rsph9Q9D9V4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rsph9Q9D9V4 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.1■□□□□ 0.97
Rsph9Q9D9V4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rsph9Q9D9V4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph9Q9D9V4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph9Q9D9V4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rsph9Q9D9V4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rsph9Q9D9V4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph9Q9D9V4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.09■□□□□ 0.97
Rsph9Q9D9V4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph9Q9D9V4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rsph9Q9D9V4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.08■□□□□ 0.97
Rsph9Q9D9V4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rsph9Q9D9V4 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.08■□□□□ 0.97
Rsph9Q9D9V4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.08■□□□□ 0.97
Rsph9Q9D9V4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rsph9Q9D9V4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph9Q9D9V4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rsph9Q9D9V4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rsph9Q9D9V4 Gm14117-201ENSMUST00000122417 843 ntBASIC21.06■□□□□ 0.96
Rsph9Q9D9V4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.06■□□□□ 0.96
Rsph9Q9D9V4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph9Q9D9V4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph9Q9D9V4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph9Q9D9V4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rsph9Q9D9V4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rsph9Q9D9V4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rsph9Q9D9V4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rsph9Q9D9V4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rsph9Q9D9V4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.03■□□□□ 0.96
Rsph9Q9D9V4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rsph9Q9D9V4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rsph9Q9D9V4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rsph9Q9D9V4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph9Q9D9V4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph9Q9D9V4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rsph9Q9D9V4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rsph9Q9D9V4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21■□□□□ 0.95
Rsph9Q9D9V4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21■□□□□ 0.95
Rsph9Q9D9V4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rsph9Q9D9V4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rsph9Q9D9V4 Gm28536-201ENSMUST00000190971 1317 ntBASIC21■□□□□ 0.95
Rsph9Q9D9V4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rsph9Q9D9V4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph9Q9D9V4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rsph9Q9D9V4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.99■□□□□ 0.95
Rsph9Q9D9V4 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.99■□□□□ 0.95
Rsph9Q9D9V4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms