Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Echdc3Q9D7J9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Echdc3Q9D7J9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.89■□□□□ 0.93
Echdc3Q9D7J9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
Echdc3Q9D7J9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Echdc3Q9D7J9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Echdc3Q9D7J9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Echdc3Q9D7J9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Echdc3Q9D7J9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Echdc3Q9D7J9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Echdc3Q9D7J9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Echdc3Q9D7J9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Echdc3Q9D7J9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.85■□□□□ 0.93
Echdc3Q9D7J9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Echdc3Q9D7J9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Echdc3Q9D7J9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Echdc3Q9D7J9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Echdc3Q9D7J9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Echdc3Q9D7J9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Echdc3Q9D7J9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Echdc3Q9D7J9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.82■□□□□ 0.92
Echdc3Q9D7J9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.82■□□□□ 0.92
Echdc3Q9D7J9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Echdc3Q9D7J9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Echdc3Q9D7J9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Echdc3Q9D7J9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Echdc3Q9D7J9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Echdc3Q9D7J9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Echdc3Q9D7J9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Echdc3Q9D7J9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Echdc3Q9D7J9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.8■□□□□ 0.92
Echdc3Q9D7J9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Echdc3Q9D7J9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.78■□□□□ 0.92
Echdc3Q9D7J9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Echdc3Q9D7J9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Echdc3Q9D7J9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Echdc3Q9D7J9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Echdc3Q9D7J9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Echdc3Q9D7J9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms