Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim13Q9CYB0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim13Q9CYB0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.83■□□□□ 0.77
Trim13Q9CYB0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim13Q9CYB0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim13Q9CYB0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim13Q9CYB0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim13Q9CYB0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Trim13Q9CYB0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim13Q9CYB0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim13Q9CYB0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim13Q9CYB0 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.82■□□□□ 0.76
Trim13Q9CYB0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim13Q9CYB0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim13Q9CYB0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim13Q9CYB0 Gm22567-201ENSMUST00000175542 342 ntBASIC19.8■□□□□ 0.76
Trim13Q9CYB0 Gm4799-201ENSMUST00000095396 657 ntBASIC19.8■□□□□ 0.76
Trim13Q9CYB0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim13Q9CYB0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim13Q9CYB0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Gm9812-201ENSMUST00000061934 968 ntBASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim13Q9CYB0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim13Q9CYB0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim13Q9CYB0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.77■□□□□ 0.75
Trim13Q9CYB0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim13Q9CYB0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim13Q9CYB0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim13Q9CYB0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim13Q9CYB0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim13Q9CYB0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim13Q9CYB0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Trim13Q9CYB0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.73■□□□□ 0.75
Trim13Q9CYB0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trim13Q9CYB0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms