Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ssr1Q9CY50 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ssr1Q9CY50 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ssr1Q9CY50 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.21■■□□□ 1.31
Ssr1Q9CY50 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ssr1Q9CY50 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Ssr1Q9CY50 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.21■■□□□ 1.31
Ssr1Q9CY50 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.2■■□□□ 1.3
Ssr1Q9CY50 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ssr1Q9CY50 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssr1Q9CY50 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssr1Q9CY50 Scarna2-201ENSMUST00000157560 414 ntBASIC23.19■■□□□ 1.3
Ssr1Q9CY50 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ssr1Q9CY50 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.18■■□□□ 1.3
Ssr1Q9CY50 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.18■■□□□ 1.3
Ssr1Q9CY50 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ssr1Q9CY50 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ssr1Q9CY50 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ssr1Q9CY50 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ssr1Q9CY50 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ssr1Q9CY50 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.17■■□□□ 1.3
Ssr1Q9CY50 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ssr1Q9CY50 Gm16437-201ENSMUST00000025669 507 ntBASIC23.17■■□□□ 1.3
Ssr1Q9CY50 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssr1Q9CY50 Notumos-201ENSMUST00000151998 2659 ntBASIC23.16■■□□□ 1.3
Ssr1Q9CY50 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssr1Q9CY50 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssr1Q9CY50 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssr1Q9CY50 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssr1Q9CY50 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ssr1Q9CY50 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ssr1Q9CY50 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ssr1Q9CY50 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.15■■□□□ 1.3
Ssr1Q9CY50 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Ssr1Q9CY50 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ssr1Q9CY50 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.14■■□□□ 1.3
Ssr1Q9CY50 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ssr1Q9CY50 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ssr1Q9CY50 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.14■■□□□ 1.29
Ssr1Q9CY50 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ssr1Q9CY50 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.13■■□□□ 1.29
Ssr1Q9CY50 Gm9806-201ENSMUST00000051080 552 ntBASIC23.13■■□□□ 1.29
Ssr1Q9CY50 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssr1Q9CY50 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.12■■□□□ 1.29
Ssr1Q9CY50 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ssr1Q9CY50 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssr1Q9CY50 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ssr1Q9CY50 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssr1Q9CY50 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssr1Q9CY50 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssr1Q9CY50 Gm44428-201ENSMUST00000204474 874 ntBASIC23.09■■□□□ 1.29
Ssr1Q9CY50 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssr1Q9CY50 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssr1Q9CY50 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ssr1Q9CY50 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ssr1Q9CY50 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ssr1Q9CY50 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ssr1Q9CY50 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ssr1Q9CY50 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Gm11687-201ENSMUST00000118911 886 ntBASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssr1Q9CY50 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ssr1Q9CY50 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ssr1Q9CY50 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Ssr1Q9CY50 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ssr1Q9CY50 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.05■■□□□ 1.28
Ssr1Q9CY50 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ssr1Q9CY50 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ssr1Q9CY50 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ssr1Q9CY50 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ssr1Q9CY50 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms