Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Gm5131-201ENSMUST00000212776 1238 ntBASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC11.56□□□□□ -0.56
Sec61bQ9CQS8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Gm28536-201ENSMUST00000190971 1317 ntBASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61bQ9CQS8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61bQ9CQS8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sec61bQ9CQS8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sec61bQ9CQS8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sec61bQ9CQS8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61bQ9CQS8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC11.52□□□□□ -0.57
Sec61bQ9CQS8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61bQ9CQS8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61bQ9CQS8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61bQ9CQS8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sec61bQ9CQS8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Gm11847-201ENSMUST00000125165 1119 ntBASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC11.51□□□□□ -0.57
Sec61bQ9CQS8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Gm40881-201ENSMUST00000223397 166 ntBASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sec61bQ9CQS8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Gm10399-202ENSMUST00000202768 748 ntBASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Sec61bQ9CQS8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms