Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp1b1Q99LU0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chmp1b1Q99LU0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp1b1Q99LU0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.22■□□□□ 0.83
Chmp1b1Q99LU0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp1b1Q99LU0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp1b1Q99LU0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chmp1b1Q99LU0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chmp1b1Q99LU0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Chmp1b1Q99LU0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp1b1Q99LU0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Gm7332-201ENSMUST00000118351 454 ntBASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp1b1Q99LU0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Gm14523-201ENSMUST00000117260 558 ntBASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Gm12366-201ENSMUST00000121722 873 ntBASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Gm5786-201ENSMUST00000085368 882 ntBASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp1b1Q99LU0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1b1Q99LU0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1b1Q99LU0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1b1Q99LU0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1b1Q99LU0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1b1Q99LU0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp1b1Q99LU0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chmp1b1Q99LU0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp1b1Q99LU0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp1b1Q99LU0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.14■□□□□ 0.81
Chmp1b1Q99LU0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp1b1Q99LU0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.14■□□□□ 0.81
Chmp1b1Q99LU0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp1b1Q99LU0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Chmp1b1Q99LU0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Chmp1b1Q99LU0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.12■□□□□ 0.81
Chmp1b1Q99LU0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp1b1Q99LU0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms