Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhb22Q91XZ8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhb22Q91XZ8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhb22Q91XZ8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb22Q91XZ8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb22Q91XZ8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb22Q91XZ8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb22Q91XZ8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.38■■□□□ 1.65
Pcdhb22Q91XZ8 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.38■■□□□ 1.65
Pcdhb22Q91XZ8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb22Q91XZ8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb22Q91XZ8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Pcdhb22Q91XZ8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.35■■□□□ 1.65
Pcdhb22Q91XZ8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Gm5921-201ENSMUST00000075898 882 ntBASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb22Q91XZ8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb22Q91XZ8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.33■■□□□ 1.65
Pcdhb22Q91XZ8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb22Q91XZ8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.33■■□□□ 1.65
Pcdhb22Q91XZ8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.33■■□□□ 1.65
Pcdhb22Q91XZ8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.33■■□□□ 1.65
Pcdhb22Q91XZ8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
Pcdhb22Q91XZ8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb22Q91XZ8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb22Q91XZ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb22Q91XZ8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.32■■□□□ 1.64
Pcdhb22Q91XZ8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Pcdhb22Q91XZ8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb22Q91XZ8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb22Q91XZ8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb22Q91XZ8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.31■■□□□ 1.64
Pcdhb22Q91XZ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.31■■□□□ 1.64
Pcdhb22Q91XZ8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Pcdhb22Q91XZ8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb22Q91XZ8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Pcdhb22Q91XZ8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb22Q91XZ8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb22Q91XZ8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb22Q91XZ8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb22Q91XZ8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb22Q91XZ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.26■■□□□ 1.63
Pcdhb22Q91XZ8 Gm45444-201ENSMUST00000211394 898 ntBASIC25.26■■□□□ 1.63
Pcdhb22Q91XZ8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb22Q91XZ8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb22Q91XZ8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb22Q91XZ8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb22Q91XZ8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb22Q91XZ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhb22Q91XZ8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhb22Q91XZ8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb22Q91XZ8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.24■■□□□ 1.63
Pcdhb22Q91XZ8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb22Q91XZ8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Pcdhb22Q91XZ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb22Q91XZ8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb22Q91XZ8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb22Q91XZ8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb22Q91XZ8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb22Q91XZ8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.22■■□□□ 1.63
Pcdhb22Q91XZ8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb22Q91XZ8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb22Q91XZ8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms