Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga6Q91XY2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga6Q91XY2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga6Q91XY2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.36■■□□□ 1.01
Pcdhga6Q91XY2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.36■■□□□ 1.01
Pcdhga6Q91XY2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga6Q91XY2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga6Q91XY2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Gm22238-201ENSMUST00000175222 88 ntBASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga6Q91XY2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga6Q91XY2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdhga6Q91XY2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga6Q91XY2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga6Q91XY2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhga6Q91XY2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.32■■□□□ 1
Pcdhga6Q91XY2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.32■■□□□ 1
Pcdhga6Q91XY2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga6Q91XY2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Pcdhga6Q91XY2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.31■■□□□ 1
Pcdhga6Q91XY2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhga6Q91XY2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhga6Q91XY2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga6Q91XY2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhga6Q91XY2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhga6Q91XY2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga6Q91XY2 Gm12922-201ENSMUST00000120626 809 ntBASIC21.29■■□□□ 1
Pcdhga6Q91XY2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.29■■□□□ 1
Pcdhga6Q91XY2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga6Q91XY2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga6Q91XY2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.29■■□□□ 1
Pcdhga6Q91XY2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhga6Q91XY2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga6Q91XY2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga6Q91XY2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga6Q91XY2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga6Q91XY2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga6Q91XY2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdhga6Q91XY2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Pcdhga6Q91XY2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga6Q91XY2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga6Q91XY2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.27■□□□□ 0.99
Pcdhga6Q91XY2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Gm40881-201ENSMUST00000223397 166 ntBASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhga6Q91XY2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga6Q91XY2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.25■□□□□ 0.99
Pcdhga6Q91XY2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga6Q91XY2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhga6Q91XY2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga6Q91XY2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhga6Q91XY2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga6Q91XY2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga6Q91XY2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga6Q91XY2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga6Q91XY2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhga6Q91XY2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga6Q91XY2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga6Q91XY2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga6Q91XY2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 637.5 ms