Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhgb4Q91XX6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhgb4Q91XX6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.84■■□□□ 1.25
Pcdhgb4Q91XX6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhgb4Q91XX6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
Pcdhgb4Q91XX6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.83■■□□□ 1.25
Pcdhgb4Q91XX6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhgb4Q91XX6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.82■■□□□ 1.24
Pcdhgb4Q91XX6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb4Q91XX6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb4Q91XX6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb4Q91XX6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb4Q91XX6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb4Q91XX6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhgb4Q91XX6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.8■■□□□ 1.24
Pcdhgb4Q91XX6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhgb4Q91XX6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.79■■□□□ 1.24
Pcdhgb4Q91XX6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgb4Q91XX6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhgb4Q91XX6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhgb4Q91XX6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Pcdhgb4Q91XX6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb4Q91XX6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhgb4Q91XX6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Pcdhgb4Q91XX6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgb4Q91XX6 Gm14523-201ENSMUST00000117260 558 ntBASIC22.77■■□□□ 1.24
Pcdhgb4Q91XX6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgb4Q91XX6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgb4Q91XX6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhgb4Q91XX6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhgb4Q91XX6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb4Q91XX6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb4Q91XX6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb4Q91XX6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhgb4Q91XX6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
Pcdhgb4Q91XX6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgb4Q91XX6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhgb4Q91XX6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgb4Q91XX6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhgb4Q91XX6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.73■■□□□ 1.23
Pcdhgb4Q91XX6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 Gm7332-201ENSMUST00000118351 454 ntBASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhgb4Q91XX6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgb4Q91XX6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Pcdhgb4Q91XX6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhgb4Q91XX6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.7■■□□□ 1.22
Pcdhgb4Q91XX6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb4Q91XX6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb4Q91XX6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhgb4Q91XX6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms