Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb17Q91VD8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb17Q91VD8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb17Q91VD8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb17Q91VD8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
Pcdhb17Q91VD8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb17Q91VD8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.37■■□□□ 1.17
Pcdhb17Q91VD8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhb17Q91VD8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb17Q91VD8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb17Q91VD8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.35■■□□□ 1.17
Pcdhb17Q91VD8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb17Q91VD8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Gm13238-201ENSMUST00000117655 780 ntBASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Gm43566-201ENSMUST00000196851 808 ntBASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb17Q91VD8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Pcdhb17Q91VD8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb17Q91VD8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb17Q91VD8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb17Q91VD8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb17Q91VD8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb17Q91VD8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb17Q91VD8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb17Q91VD8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb17Q91VD8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb17Q91VD8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb17Q91VD8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb17Q91VD8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdhb17Q91VD8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb17Q91VD8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb17Q91VD8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhb17Q91VD8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.27■■□□□ 1.16
Pcdhb17Q91VD8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pcdhb17Q91VD8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb17Q91VD8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhb17Q91VD8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb17Q91VD8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb17Q91VD8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb17Q91VD8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Pcdhb17Q91VD8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb17Q91VD8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb17Q91VD8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms