Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.45■■□□□ 1.02
Vsx1Q91V10 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vsx1Q91V10 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.44■■□□□ 1.02
Vsx1Q91V10 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Vsx1Q91V10 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vsx1Q91V10 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vsx1Q91V10 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.44■■□□□ 1.02
Vsx1Q91V10 Gm40881-201ENSMUST00000223397 166 ntBASIC21.44■■□□□ 1.02
Vsx1Q91V10 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.44■■□□□ 1.02
Vsx1Q91V10 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vsx1Q91V10 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vsx1Q91V10 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Vsx1Q91V10 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Vsx1Q91V10 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vsx1Q91V10 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.43■■□□□ 1.02
Vsx1Q91V10 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vsx1Q91V10 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.42■■□□□ 1.02
Vsx1Q91V10 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.42■■□□□ 1.02
Vsx1Q91V10 Gm27454-201ENSMUST00000185090 204 ntBASIC21.42■■□□□ 1.02
Vsx1Q91V10 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Vsx1Q91V10 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vsx1Q91V10 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vsx1Q91V10 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vsx1Q91V10 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vsx1Q91V10 Gm12922-201ENSMUST00000120626 809 ntBASIC21.41■■□□□ 1.02
Vsx1Q91V10 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vsx1Q91V10 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vsx1Q91V10 Gm45417-201ENSMUST00000209533 758 ntBASIC21.41■■□□□ 1.02
Vsx1Q91V10 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.41■■□□□ 1.02
Vsx1Q91V10 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vsx1Q91V10 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vsx1Q91V10 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.4■■□□□ 1.02
Vsx1Q91V10 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.4■■□□□ 1.02
Vsx1Q91V10 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vsx1Q91V10 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Vsx1Q91V10 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vsx1Q91V10 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vsx1Q91V10 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vsx1Q91V10 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Vsx1Q91V10 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vsx1Q91V10 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vsx1Q91V10 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Vsx1Q91V10 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vsx1Q91V10 Gm12821-201ENSMUST00000120022 600 ntBASIC21.38■■□□□ 1.01
Vsx1Q91V10 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vsx1Q91V10 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.38■■□□□ 1.01
Vsx1Q91V10 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vsx1Q91V10 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.38■■□□□ 1.01
Vsx1Q91V10 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vsx1Q91V10 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vsx1Q91V10 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vsx1Q91V10 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.37■■□□□ 1.01
Vsx1Q91V10 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
Vsx1Q91V10 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vsx1Q91V10 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vsx1Q91V10 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vsx1Q91V10 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vsx1Q91V10 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vsx1Q91V10 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vsx1Q91V10 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.35■■□□□ 1.01
Vsx1Q91V10 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vsx1Q91V10 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vsx1Q91V10 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vsx1Q91V10 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Vsx1Q91V10 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.34■■□□□ 1.01
Vsx1Q91V10 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vsx1Q91V10 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vsx1Q91V10 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vsx1Q91V10 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Vsx1Q91V10 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vsx1Q91V10 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.33■■□□□ 1.01
Vsx1Q91V10 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.33■■□□□ 1
Vsx1Q91V10 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Vsx1Q91V10 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vsx1Q91V10 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.32■■□□□ 1
Vsx1Q91V10 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vsx1Q91V10 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vsx1Q91V10 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vsx1Q91V10 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vsx1Q91V10 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vsx1Q91V10 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vsx1Q91V10 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vsx1Q91V10 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vsx1Q91V10 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Vsx1Q91V10 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.3■■□□□ 1
Vsx1Q91V10 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.29■■□□□ 1
Vsx1Q91V10 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.29■■□□□ 1
Vsx1Q91V10 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms