Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
StrcQ8VIM6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
StrcQ8VIM6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.8■■□□□ 1.88
StrcQ8VIM6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
StrcQ8VIM6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
StrcQ8VIM6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.79■■□□□ 1.88
StrcQ8VIM6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.79■■□□□ 1.88
StrcQ8VIM6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.79■■□□□ 1.88
StrcQ8VIM6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
StrcQ8VIM6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
StrcQ8VIM6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
StrcQ8VIM6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.78■■□□□ 1.88
StrcQ8VIM6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
StrcQ8VIM6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
StrcQ8VIM6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC26.77■■□□□ 1.88
StrcQ8VIM6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
StrcQ8VIM6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
StrcQ8VIM6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
StrcQ8VIM6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
StrcQ8VIM6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
StrcQ8VIM6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
StrcQ8VIM6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
StrcQ8VIM6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
StrcQ8VIM6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.74■■□□□ 1.87
StrcQ8VIM6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
StrcQ8VIM6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
StrcQ8VIM6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.72■■□□□ 1.87
StrcQ8VIM6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC26.72■■□□□ 1.87
StrcQ8VIM6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC26.72■■□□□ 1.87
StrcQ8VIM6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.72■■□□□ 1.87
StrcQ8VIM6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC26.72■■□□□ 1.87
StrcQ8VIM6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
StrcQ8VIM6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
StrcQ8VIM6 Gm18284-201ENSMUST00000172604 624 ntBASIC26.7■■□□□ 1.87
StrcQ8VIM6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
StrcQ8VIM6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
StrcQ8VIM6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
StrcQ8VIM6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.69■■□□□ 1.86
StrcQ8VIM6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
StrcQ8VIM6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
StrcQ8VIM6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
StrcQ8VIM6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
StrcQ8VIM6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
StrcQ8VIM6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
StrcQ8VIM6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
StrcQ8VIM6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
StrcQ8VIM6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
StrcQ8VIM6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
StrcQ8VIM6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.67■■□□□ 1.86
StrcQ8VIM6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
StrcQ8VIM6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
StrcQ8VIM6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
StrcQ8VIM6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
StrcQ8VIM6 Gm2011-201ENSMUST00000203124 1263 ntBASIC26.65■■□□□ 1.86
StrcQ8VIM6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.65■■□□□ 1.86
StrcQ8VIM6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
StrcQ8VIM6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
StrcQ8VIM6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
StrcQ8VIM6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
StrcQ8VIM6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
StrcQ8VIM6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
StrcQ8VIM6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
StrcQ8VIM6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
StrcQ8VIM6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC26.6■■□□□ 1.85
StrcQ8VIM6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
StrcQ8VIM6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
StrcQ8VIM6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
StrcQ8VIM6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
StrcQ8VIM6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
StrcQ8VIM6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.59■■□□□ 1.85
StrcQ8VIM6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
StrcQ8VIM6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.59■■□□□ 1.85
StrcQ8VIM6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
StrcQ8VIM6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
StrcQ8VIM6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
StrcQ8VIM6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
StrcQ8VIM6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
StrcQ8VIM6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms