Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nudcd3Q8R1N4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Nudcd3Q8R1N4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.53■■□□□ 1.04
Nudcd3Q8R1N4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nudcd3Q8R1N4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nudcd3Q8R1N4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Nudcd3Q8R1N4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
Nudcd3Q8R1N4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nudcd3Q8R1N4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nudcd3Q8R1N4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.52■■□□□ 1.04
Nudcd3Q8R1N4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nudcd3Q8R1N4 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.52■■□□□ 1.03
Nudcd3Q8R1N4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nudcd3Q8R1N4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nudcd3Q8R1N4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nudcd3Q8R1N4 Mir3960-201ENSMUST00000198213 73 ntBASIC21.51■■□□□ 1.03
Nudcd3Q8R1N4 Terc-201ENSMUST00000082862 423 ntBASIC21.51■■□□□ 1.03
Nudcd3Q8R1N4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nudcd3Q8R1N4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nudcd3Q8R1N4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Nudcd3Q8R1N4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nudcd3Q8R1N4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nudcd3Q8R1N4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nudcd3Q8R1N4 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.48■■□□□ 1.03
Nudcd3Q8R1N4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nudcd3Q8R1N4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nudcd3Q8R1N4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.47■■□□□ 1.03
Nudcd3Q8R1N4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Nudcd3Q8R1N4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.46■■□□□ 1.03
Nudcd3Q8R1N4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
Nudcd3Q8R1N4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nudcd3Q8R1N4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nudcd3Q8R1N4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.45■■□□□ 1.02
Nudcd3Q8R1N4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nudcd3Q8R1N4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nudcd3Q8R1N4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 Gm8503-201ENSMUST00000118131 455 ntBASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nudcd3Q8R1N4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Nudcd3Q8R1N4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Gm45364-201ENSMUST00000210883 159 ntBASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nudcd3Q8R1N4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms