Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sf3a1Q8K4Z5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Sf3a1Q8K4Z5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sf3a1Q8K4Z5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.42■■□□□ 1.82
Sf3a1Q8K4Z5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sf3a1Q8K4Z5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Sf3a1Q8K4Z5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sf3a1Q8K4Z5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Sf3a1Q8K4Z5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sf3a1Q8K4Z5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sf3a1Q8K4Z5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Sf3a1Q8K4Z5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sf3a1Q8K4Z5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Sf3a1Q8K4Z5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Sf3a1Q8K4Z5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Sf3a1Q8K4Z5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC26.39■■□□□ 1.82
Sf3a1Q8K4Z5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Sf3a1Q8K4Z5 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Sf3a1Q8K4Z5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC26.39■■□□□ 1.81
Sf3a1Q8K4Z5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Sf3a1Q8K4Z5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sf3a1Q8K4Z5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sf3a1Q8K4Z5 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.37■■□□□ 1.81
Sf3a1Q8K4Z5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Sf3a1Q8K4Z5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sf3a1Q8K4Z5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sf3a1Q8K4Z5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Sf3a1Q8K4Z5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.35■■□□□ 1.81
Sf3a1Q8K4Z5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sf3a1Q8K4Z5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.35■■□□□ 1.81
Sf3a1Q8K4Z5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sf3a1Q8K4Z5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sf3a1Q8K4Z5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Sf3a1Q8K4Z5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC26.34■■□□□ 1.81
Sf3a1Q8K4Z5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Sf3a1Q8K4Z5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sf3a1Q8K4Z5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sf3a1Q8K4Z5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sf3a1Q8K4Z5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.33■■□□□ 1.81
Sf3a1Q8K4Z5 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.33■■□□□ 1.81
Sf3a1Q8K4Z5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Sf3a1Q8K4Z5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sf3a1Q8K4Z5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sf3a1Q8K4Z5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Gm45444-201ENSMUST00000211394 898 ntBASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sf3a1Q8K4Z5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Gm13238-201ENSMUST00000117655 780 ntBASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Sf3a1Q8K4Z5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sf3a1Q8K4Z5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sf3a1Q8K4Z5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms