Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Clrn1Q8K445 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn1Q8K445 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn1Q8K445 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clrn1Q8K445 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.33■□□□□ 0.85
Clrn1Q8K445 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.33■□□□□ 0.85
Clrn1Q8K445 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Clrn1Q8K445 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.33■□□□□ 0.85
Clrn1Q8K445 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Clrn1Q8K445 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Clrn1Q8K445 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Clrn1Q8K445 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clrn1Q8K445 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn1Q8K445 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn1Q8K445 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Clrn1Q8K445 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn1Q8K445 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clrn1Q8K445 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.3■□□□□ 0.84
Clrn1Q8K445 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clrn1Q8K445 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Clrn1Q8K445 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Clrn1Q8K445 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn1Q8K445 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn1Q8K445 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn1Q8K445 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Clrn1Q8K445 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clrn1Q8K445 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Clrn1Q8K445 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clrn1Q8K445 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clrn1Q8K445 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clrn1Q8K445 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Clrn1Q8K445 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clrn1Q8K445 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.24■□□□□ 0.83
Clrn1Q8K445 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clrn1Q8K445 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.24■□□□□ 0.83
Clrn1Q8K445 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clrn1Q8K445 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Clrn1Q8K445 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clrn1Q8K445 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clrn1Q8K445 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clrn1Q8K445 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clrn1Q8K445 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms