Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.56■■□□□ 1.68
Cchcr1Q8K2I2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.55■■□□□ 1.68
Cchcr1Q8K2I2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Cchcr1Q8K2I2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cchcr1Q8K2I2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cchcr1Q8K2I2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cchcr1Q8K2I2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cchcr1Q8K2I2 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.52■■□□□ 1.68
Cchcr1Q8K2I2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cchcr1Q8K2I2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Cchcr1Q8K2I2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.51■■□□□ 1.67
Cchcr1Q8K2I2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.5■■□□□ 1.67
Cchcr1Q8K2I2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Cchcr1Q8K2I2 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.5■■□□□ 1.67
Cchcr1Q8K2I2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cchcr1Q8K2I2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cchcr1Q8K2I2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Cchcr1Q8K2I2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cchcr1Q8K2I2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cchcr1Q8K2I2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cchcr1Q8K2I2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cchcr1Q8K2I2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cchcr1Q8K2I2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cchcr1Q8K2I2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cchcr1Q8K2I2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cchcr1Q8K2I2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cchcr1Q8K2I2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Cchcr1Q8K2I2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cchcr1Q8K2I2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cchcr1Q8K2I2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cchcr1Q8K2I2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cchcr1Q8K2I2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.45■■□□□ 1.66
Cchcr1Q8K2I2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cchcr1Q8K2I2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Cchcr1Q8K2I2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Cchcr1Q8K2I2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cchcr1Q8K2I2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cchcr1Q8K2I2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.44■■□□□ 1.66
Cchcr1Q8K2I2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cchcr1Q8K2I2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cchcr1Q8K2I2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cchcr1Q8K2I2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Cchcr1Q8K2I2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC25.43■■□□□ 1.66
Cchcr1Q8K2I2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cchcr1Q8K2I2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cchcr1Q8K2I2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.43■■□□□ 1.66
Cchcr1Q8K2I2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cchcr1Q8K2I2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cchcr1Q8K2I2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cchcr1Q8K2I2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cchcr1Q8K2I2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC25.42■■□□□ 1.66
Cchcr1Q8K2I2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cchcr1Q8K2I2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cchcr1Q8K2I2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cchcr1Q8K2I2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cchcr1Q8K2I2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cchcr1Q8K2I2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
Cchcr1Q8K2I2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cchcr1Q8K2I2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Cchcr1Q8K2I2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cchcr1Q8K2I2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cchcr1Q8K2I2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cchcr1Q8K2I2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cchcr1Q8K2I2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Cchcr1Q8K2I2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cchcr1Q8K2I2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms