Protein–RNA interactions for Protein: Q8CI15

Sphk1, Sphingosine kinase 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sphk1Q8CI15 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.59■■□□□ 1.05
Sphk1Q8CI15 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sphk1Q8CI15 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sphk1Q8CI15 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Sphk1Q8CI15 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sphk1Q8CI15 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sphk1Q8CI15 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sphk1Q8CI15 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.57■■□□□ 1.04
Sphk1Q8CI15 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.57■■□□□ 1.04
Sphk1Q8CI15 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sphk1Q8CI15 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sphk1Q8CI15 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sphk1Q8CI15 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sphk1Q8CI15 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sphk1Q8CI15 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sphk1Q8CI15 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sphk1Q8CI15 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sphk1Q8CI15 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sphk1Q8CI15 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sphk1Q8CI15 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.51■■□□□ 1.03
Sphk1Q8CI15 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sphk1Q8CI15 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sphk1Q8CI15 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sphk1Q8CI15 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.5■■□□□ 1.03
Sphk1Q8CI15 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sphk1Q8CI15 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Gm7417-201ENSMUST00000192950 473 ntBASIC21.49■■□□□ 1.03
Sphk1Q8CI15 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.49■■□□□ 1.03
Sphk1Q8CI15 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sphk1Q8CI15 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Sphk1Q8CI15 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sphk1Q8CI15 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.47■■□□□ 1.03
Sphk1Q8CI15 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sphk1Q8CI15 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Sphk1Q8CI15 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.47■■□□□ 1.03
Sphk1Q8CI15 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sphk1Q8CI15 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sphk1Q8CI15 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sphk1Q8CI15 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sphk1Q8CI15 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
Sphk1Q8CI15 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sphk1Q8CI15 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sphk1Q8CI15 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sphk1Q8CI15 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.45■■□□□ 1.02
Sphk1Q8CI15 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sphk1Q8CI15 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Gm15039-201ENSMUST00000118914 875 ntBASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.44■■□□□ 1.02
Sphk1Q8CI15 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sphk1Q8CI15 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms