Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Shisa4Q8CA71 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Shisa4Q8CA71 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Shisa4Q8CA71 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Shisa4Q8CA71 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Shisa4Q8CA71 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Shisa4Q8CA71 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Shisa4Q8CA71 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Shisa4Q8CA71 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shisa4Q8CA71 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.5■■□□□ 1.67
Shisa4Q8CA71 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shisa4Q8CA71 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Shisa4Q8CA71 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shisa4Q8CA71 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.49■■□□□ 1.67
Shisa4Q8CA71 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Shisa4Q8CA71 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.49■■□□□ 1.67
Shisa4Q8CA71 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC25.49■■□□□ 1.67
Shisa4Q8CA71 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Shisa4Q8CA71 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Shisa4Q8CA71 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shisa4Q8CA71 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Shisa4Q8CA71 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shisa4Q8CA71 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Gm15546-201ENSMUST00000122095 826 ntBASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Shisa4Q8CA71 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shisa4Q8CA71 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.46■■□□□ 1.67
Shisa4Q8CA71 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.46■■□□□ 1.67
Shisa4Q8CA71 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shisa4Q8CA71 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shisa4Q8CA71 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.45■■□□□ 1.67
Shisa4Q8CA71 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.45■■□□□ 1.66
Shisa4Q8CA71 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shisa4Q8CA71 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shisa4Q8CA71 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
Shisa4Q8CA71 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Shisa4Q8CA71 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shisa4Q8CA71 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Shisa4Q8CA71 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC25.44■■□□□ 1.66
Shisa4Q8CA71 Gm45444-201ENSMUST00000211394 898 ntBASIC25.44■■□□□ 1.66
Shisa4Q8CA71 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Shisa4Q8CA71 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shisa4Q8CA71 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shisa4Q8CA71 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Shisa4Q8CA71 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shisa4Q8CA71 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shisa4Q8CA71 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Shisa4Q8CA71 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Shisa4Q8CA71 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.4■■□□□ 1.66
Shisa4Q8CA71 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.39■■□□□ 1.66
Shisa4Q8CA71 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Shisa4Q8CA71 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.39■■□□□ 1.66
Shisa4Q8CA71 Gm43566-201ENSMUST00000196851 808 ntBASIC25.39■■□□□ 1.66
Shisa4Q8CA71 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Shisa4Q8CA71 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Shisa4Q8CA71 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Shisa4Q8CA71 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Shisa4Q8CA71 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Shisa4Q8CA71 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shisa4Q8CA71 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.36■■□□□ 1.65
Shisa4Q8CA71 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms