Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim9Q8C7M3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim9Q8C7M3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Trim9Q8C7M3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.97■■□□□ 1.43
Trim9Q8C7M3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim9Q8C7M3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Trim9Q8C7M3 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.96■■□□□ 1.43
Trim9Q8C7M3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim9Q8C7M3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim9Q8C7M3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim9Q8C7M3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Trim9Q8C7M3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Trim9Q8C7M3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trim9Q8C7M3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Trim9Q8C7M3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Trim9Q8C7M3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Trim9Q8C7M3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Trim9Q8C7M3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
Trim9Q8C7M3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Trim9Q8C7M3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Trim9Q8C7M3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim9Q8C7M3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Trim9Q8C7M3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.92■■□□□ 1.42
Trim9Q8C7M3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Trim9Q8C7M3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Trim9Q8C7M3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Trim9Q8C7M3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.9■■□□□ 1.42
Trim9Q8C7M3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Trim9Q8C7M3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.89■■□□□ 1.41
Trim9Q8C7M3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim9Q8C7M3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim9Q8C7M3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Trim9Q8C7M3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
Trim9Q8C7M3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Trim9Q8C7M3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
Trim9Q8C7M3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Trim9Q8C7M3 Gm10420-201ENSMUST00000121713 882 ntBASIC23.88■■□□□ 1.41
Trim9Q8C7M3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Trim9Q8C7M3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Trim9Q8C7M3 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.86■■□□□ 1.41
Trim9Q8C7M3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Trim9Q8C7M3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.86■■□□□ 1.41
Trim9Q8C7M3 Cap2-205ENSMUST00000225824 1634 ntBASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim9Q8C7M3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.84■■□□□ 1.41
Trim9Q8C7M3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Trim9Q8C7M3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim9Q8C7M3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim9Q8C7M3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim9Q8C7M3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Trim9Q8C7M3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.83■■□□□ 1.4
Trim9Q8C7M3 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.83■■□□□ 1.4
Trim9Q8C7M3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms