Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pabpc5Q8C7D3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pabpc5Q8C7D3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pabpc5Q8C7D3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pabpc5Q8C7D3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Pabpc5Q8C7D3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.52■■□□□ 1.04
Pabpc5Q8C7D3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
Pabpc5Q8C7D3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pabpc5Q8C7D3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pabpc5Q8C7D3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pabpc5Q8C7D3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.48■■□□□ 1.03
Pabpc5Q8C7D3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.48■■□□□ 1.03
Pabpc5Q8C7D3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pabpc5Q8C7D3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pabpc5Q8C7D3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pabpc5Q8C7D3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.45■■□□□ 1.02
Pabpc5Q8C7D3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pabpc5Q8C7D3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pabpc5Q8C7D3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms