Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cps1Q8C196 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cps1Q8C196 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cps1Q8C196 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Cps1Q8C196 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Cps1Q8C196 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Cps1Q8C196 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Cps1Q8C196 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Cps1Q8C196 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Cps1Q8C196 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Cps1Q8C196 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC30.03■■■□□ 2.4
Cps1Q8C196 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC30.03■■■□□ 2.4
Cps1Q8C196 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC30.03■■■□□ 2.4
Cps1Q8C196 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Cps1Q8C196 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Cps1Q8C196 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cps1Q8C196 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cps1Q8C196 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Cps1Q8C196 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC30.01■■■□□ 2.4
Cps1Q8C196 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC30.01■■■□□ 2.4
Cps1Q8C196 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Cps1Q8C196 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cps1Q8C196 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cps1Q8C196 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Cps1Q8C196 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC30.01■■■□□ 2.39
Cps1Q8C196 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Cps1Q8C196 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cps1Q8C196 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Cps1Q8C196 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Cps1Q8C196 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC29.99■■■□□ 2.39
Cps1Q8C196 AC140930.3-201ENSMUST00000222935 274 ntBASIC29.99■■■□□ 2.39
Cps1Q8C196 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Cps1Q8C196 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC29.98■■■□□ 2.39
Cps1Q8C196 Gm27454-201ENSMUST00000185090 204 ntBASIC29.98■■■□□ 2.39
Cps1Q8C196 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Cps1Q8C196 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Cps1Q8C196 Gm28731-201ENSMUST00000185564 1569 ntBASIC29.98■■■□□ 2.39
Cps1Q8C196 Gm42699-201ENSMUST00000198104 1657 ntBASIC29.97■■■□□ 2.39
Cps1Q8C196 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC29.97■■■□□ 2.39
Cps1Q8C196 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Cps1Q8C196 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Cps1Q8C196 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Cps1Q8C196 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
Cps1Q8C196 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC29.96■■■□□ 2.39
Cps1Q8C196 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cps1Q8C196 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Cps1Q8C196 Appbp2os-202ENSMUST00000206972 447 ntBASIC29.96■■■□□ 2.39
Cps1Q8C196 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cps1Q8C196 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC29.95■■■□□ 2.38
Cps1Q8C196 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cps1Q8C196 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cps1Q8C196 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cps1Q8C196 Golgb1-201ENSMUST00000023534 498 ntBASIC29.94■■■□□ 2.38
Cps1Q8C196 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cps1Q8C196 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC29.92■■■□□ 2.38
Cps1Q8C196 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Cps1Q8C196 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Cps1Q8C196 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Cps1Q8C196 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Cps1Q8C196 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Cps1Q8C196 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC29.91■■■□□ 2.38
Cps1Q8C196 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC29.91■■■□□ 2.38
Cps1Q8C196 Serp2-204ENSMUST00000228055 705 ntBASIC29.91■■■□□ 2.38
Cps1Q8C196 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC29.9■■■□□ 2.38
Cps1Q8C196 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC29.9■■■□□ 2.38
Cps1Q8C196 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Cps1Q8C196 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Cps1Q8C196 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Cps1Q8C196 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC29.89■■■□□ 2.38
Cps1Q8C196 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Cps1Q8C196 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cps1Q8C196 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Cps1Q8C196 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
Cps1Q8C196 Gm45417-201ENSMUST00000209533 758 ntBASIC29.87■■■□□ 2.37
Cps1Q8C196 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Cps1Q8C196 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Cps1Q8C196 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
Cps1Q8C196 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cps1Q8C196 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cps1Q8C196 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cps1Q8C196 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Cps1Q8C196 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC29.86■■■□□ 2.37
Cps1Q8C196 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cps1Q8C196 Gm12821-201ENSMUST00000120022 600 ntBASIC29.85■■■□□ 2.37
Cps1Q8C196 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Cps1Q8C196 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
Cps1Q8C196 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Cps1Q8C196 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cps1Q8C196 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Cps1Q8C196 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC29.84■■■□□ 2.37
Cps1Q8C196 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC29.84■■■□□ 2.37
Cps1Q8C196 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cps1Q8C196 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Cps1Q8C196 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Cps1Q8C196 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Cps1Q8C196 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC29.83■■■□□ 2.37
Cps1Q8C196 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Cps1Q8C196 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
Cps1Q8C196 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Cps1Q8C196 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms