Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.34■□□□□ 0.53
Lsm11Q8BUV6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm11Q8BUV6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm11Q8BUV6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lsm11Q8BUV6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.34■□□□□ 0.53
Lsm11Q8BUV6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lsm11Q8BUV6 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.33■□□□□ 0.53
Lsm11Q8BUV6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Lsm11Q8BUV6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.33■□□□□ 0.52
Lsm11Q8BUV6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm11Q8BUV6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm11Q8BUV6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lsm11Q8BUV6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Terc-201ENSMUST00000082862 423 ntBASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lsm11Q8BUV6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Mir3960-201ENSMUST00000198213 73 ntBASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lsm11Q8BUV6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lsm11Q8BUV6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Lsm11Q8BUV6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lsm11Q8BUV6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.29■□□□□ 0.52
Lsm11Q8BUV6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.29■□□□□ 0.52
Lsm11Q8BUV6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lsm11Q8BUV6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lsm11Q8BUV6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lsm11Q8BUV6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lsm11Q8BUV6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.25■□□□□ 0.51
Lsm11Q8BUV6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Lsm11Q8BUV6 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.25■□□□□ 0.51
Lsm11Q8BUV6 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.25■□□□□ 0.51
Lsm11Q8BUV6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Lsm11Q8BUV6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Lsm11Q8BUV6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm11Q8BUV6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm11Q8BUV6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm11Q8BUV6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm11Q8BUV6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm11Q8BUV6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Lsm11Q8BUV6 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Lsm11Q8BUV6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Lsm11Q8BUV6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms