Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne3Q8BT60 Gm11687-201ENSMUST00000118911 886 ntBASIC20.76■□□□□ 0.91
Cpne3Q8BT60 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne3Q8BT60 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne3Q8BT60 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Cpne3Q8BT60 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpne3Q8BT60 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.75■□□□□ 0.91
Cpne3Q8BT60 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne3Q8BT60 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.74■□□□□ 0.91
Cpne3Q8BT60 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpne3Q8BT60 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Cpne3Q8BT60 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpne3Q8BT60 Gm22567-201ENSMUST00000175542 342 ntBASIC20.73■□□□□ 0.91
Cpne3Q8BT60 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne3Q8BT60 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpne3Q8BT60 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpne3Q8BT60 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne3Q8BT60 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.71■□□□□ 0.91
Cpne3Q8BT60 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne3Q8BT60 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpne3Q8BT60 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cpne3Q8BT60 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.7■□□□□ 0.91
Cpne3Q8BT60 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cpne3Q8BT60 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne3Q8BT60 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne3Q8BT60 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.7■□□□□ 0.9
Cpne3Q8BT60 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne3Q8BT60 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpne3Q8BT60 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne3Q8BT60 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne3Q8BT60 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.69■□□□□ 0.9
Cpne3Q8BT60 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.69■□□□□ 0.9
Cpne3Q8BT60 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne3Q8BT60 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne3Q8BT60 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpne3Q8BT60 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpne3Q8BT60 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne3Q8BT60 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne3Q8BT60 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne3Q8BT60 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cpne3Q8BT60 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.67■□□□□ 0.9
Cpne3Q8BT60 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpne3Q8BT60 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.66■□□□□ 0.9
Cpne3Q8BT60 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpne3Q8BT60 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpne3Q8BT60 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.64■□□□□ 0.89
Cpne3Q8BT60 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpne3Q8BT60 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne3Q8BT60 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne3Q8BT60 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne3Q8BT60 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne3Q8BT60 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpne3Q8BT60 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.63■□□□□ 0.89
Cpne3Q8BT60 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms