Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ppp1r3eQ8BRJ4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ppp1r3eQ8BRJ4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp1r3eQ8BRJ4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp1r3eQ8BRJ4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ppp1r3eQ8BRJ4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp1r3eQ8BRJ4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp1r3eQ8BRJ4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp1r3eQ8BRJ4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp1r3eQ8BRJ4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ppp1r3eQ8BRJ4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ppp1r3eQ8BRJ4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp1r3eQ8BRJ4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp1r3eQ8BRJ4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp1r3eQ8BRJ4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp1r3eQ8BRJ4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp1r3eQ8BRJ4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ppp1r3eQ8BRJ4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ppp1r3eQ8BRJ4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ppp1r3eQ8BRJ4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp1r3eQ8BRJ4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp1r3eQ8BRJ4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ppp1r3eQ8BRJ4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ppp1r3eQ8BRJ4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ppp1r3eQ8BRJ4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp1r3eQ8BRJ4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Ppp1r3eQ8BRJ4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp1r3eQ8BRJ4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ppp1r3eQ8BRJ4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ppp1r3eQ8BRJ4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp1r3eQ8BRJ4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.2■□□□□ 0.82
Ppp1r3eQ8BRJ4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ppp1r3eQ8BRJ4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp1r3eQ8BRJ4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp1r3eQ8BRJ4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp1r3eQ8BRJ4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp1r3eQ8BRJ4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp1r3eQ8BRJ4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp1r3eQ8BRJ4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp1r3eQ8BRJ4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp1r3eQ8BRJ4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp1r3eQ8BRJ4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp1r3eQ8BRJ4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp1r3eQ8BRJ4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp1r3eQ8BRJ4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp1r3eQ8BRJ4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp1r3eQ8BRJ4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp1r3eQ8BRJ4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ppp1r3eQ8BRJ4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp1r3eQ8BRJ4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.13■□□□□ 0.81
Ppp1r3eQ8BRJ4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Ppp1r3eQ8BRJ4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp1r3eQ8BRJ4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms