Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nhlrc1Q8BR37 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Gm15039-201ENSMUST00000118914 875 ntBASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nhlrc1Q8BR37 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nhlrc1Q8BR37 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Etf1-202ENSMUST00000180351 108 ntBASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nhlrc1Q8BR37 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nhlrc1Q8BR37 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nhlrc1Q8BR37 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhlrc1Q8BR37 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhlrc1Q8BR37 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nhlrc1Q8BR37 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nhlrc1Q8BR37 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.59■□□□□ 0.25
Nhlrc1Q8BR37 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nhlrc1Q8BR37 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.58■□□□□ 0.25
Nhlrc1Q8BR37 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Nhlrc1Q8BR37 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nhlrc1Q8BR37 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nhlrc1Q8BR37 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nhlrc1Q8BR37 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nhlrc1Q8BR37 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.55■□□□□ 0.24
Nhlrc1Q8BR37 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms