Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.72■□□□□ 0.59
Smg1Q8BKX6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smg1Q8BKX6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smg1Q8BKX6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smg1Q8BKX6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smg1Q8BKX6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smg1Q8BKX6 Gm10849-201ENSMUST00000100397 618 ntBASIC18.71■□□□□ 0.59
Smg1Q8BKX6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smg1Q8BKX6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Smg1Q8BKX6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Gm40881-201ENSMUST00000223397 166 ntBASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smg1Q8BKX6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg1Q8BKX6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg1Q8BKX6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg1Q8BKX6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg1Q8BKX6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smg1Q8BKX6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smg1Q8BKX6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.67■□□□□ 0.58
Smg1Q8BKX6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smg1Q8BKX6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Smg1Q8BKX6 Gm6139-201ENSMUST00000079261 882 ntBASIC18.66■□□□□ 0.58
Smg1Q8BKX6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smg1Q8BKX6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smg1Q8BKX6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smg1Q8BKX6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smg1Q8BKX6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smg1Q8BKX6 Gm5874-201ENSMUST00000096101 508 ntBASIC18.64■□□□□ 0.57
Smg1Q8BKX6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smg1Q8BKX6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smg1Q8BKX6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smg1Q8BKX6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smg1Q8BKX6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smg1Q8BKX6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms