Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Srrm4Q8BKA3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Srrm4Q8BKA3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Srrm4Q8BKA3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.68■□□□□ 0.58
Srrm4Q8BKA3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Srrm4Q8BKA3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm4Q8BKA3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm4Q8BKA3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.67■□□□□ 0.58
Srrm4Q8BKA3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm4Q8BKA3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srrm4Q8BKA3 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Srrm4Q8BKA3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Srrm4Q8BKA3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Srrm4Q8BKA3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Srrm4Q8BKA3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Gm5921-201ENSMUST00000075898 882 ntBASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Srrm4Q8BKA3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Srrm4Q8BKA3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srrm4Q8BKA3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Srrm4Q8BKA3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm4Q8BKA3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm4Q8BKA3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm4Q8BKA3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srrm4Q8BKA3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.61■□□□□ 0.57
Srrm4Q8BKA3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms