Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn3bQ8BHK2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.04■□□□□ 0.8
Scn3bQ8BHK2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Scn3bQ8BHK2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn3bQ8BHK2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Scn3bQ8BHK2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn3bQ8BHK2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn3bQ8BHK2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn3bQ8BHK2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn3bQ8BHK2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.03■□□□□ 0.8
Scn3bQ8BHK2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Scn3bQ8BHK2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn3bQ8BHK2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scn3bQ8BHK2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.02■□□□□ 0.8
Scn3bQ8BHK2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn3bQ8BHK2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scn3bQ8BHK2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scn3bQ8BHK2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Scn3bQ8BHK2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scn3bQ8BHK2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scn3bQ8BHK2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn3bQ8BHK2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Scn3bQ8BHK2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Scn3bQ8BHK2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scn3bQ8BHK2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scn3bQ8BHK2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.97■□□□□ 0.79
Scn3bQ8BHK2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Scn3bQ8BHK2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scn3bQ8BHK2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn3bQ8BHK2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn3bQ8BHK2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Scn3bQ8BHK2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.93■□□□□ 0.78
Scn3bQ8BHK2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn3bQ8BHK2 Notumos-201ENSMUST00000151998 2659 ntBASIC19.93■□□□□ 0.78
Scn3bQ8BHK2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.92■□□□□ 0.78
Scn3bQ8BHK2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn3bQ8BHK2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn3bQ8BHK2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms