Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
Samm50Q8BGH2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.22■■□□□ 1.63
Samm50Q8BGH2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Samm50Q8BGH2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Samm50Q8BGH2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Samm50Q8BGH2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.21■■□□□ 1.63
Samm50Q8BGH2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Samm50Q8BGH2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Samm50Q8BGH2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.2■■□□□ 1.62
Samm50Q8BGH2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Samm50Q8BGH2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Samm50Q8BGH2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
Samm50Q8BGH2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Samm50Q8BGH2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Samm50Q8BGH2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Samm50Q8BGH2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Samm50Q8BGH2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Samm50Q8BGH2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Samm50Q8BGH2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Samm50Q8BGH2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Samm50Q8BGH2 Gm20634-201ENSMUST00000090779 2956 ntBASIC25.14■■□□□ 1.62
Samm50Q8BGH2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Samm50Q8BGH2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Samm50Q8BGH2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Samm50Q8BGH2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC25.13■■□□□ 1.61
Samm50Q8BGH2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Samm50Q8BGH2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC25.13■■□□□ 1.61
Samm50Q8BGH2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.13■■□□□ 1.61
Samm50Q8BGH2 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.13■■□□□ 1.61
Samm50Q8BGH2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Samm50Q8BGH2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Samm50Q8BGH2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Samm50Q8BGH2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Samm50Q8BGH2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Samm50Q8BGH2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Samm50Q8BGH2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.11■■□□□ 1.61
Samm50Q8BGH2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Samm50Q8BGH2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Samm50Q8BGH2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Samm50Q8BGH2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Samm50Q8BGH2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Samm50Q8BGH2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Samm50Q8BGH2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Samm50Q8BGH2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Samm50Q8BGH2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Samm50Q8BGH2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Samm50Q8BGH2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.08■■□□□ 1.61
Samm50Q8BGH2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Samm50Q8BGH2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Samm50Q8BGH2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.07■■□□□ 1.6
Samm50Q8BGH2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.07■■□□□ 1.6
Samm50Q8BGH2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.07■■□□□ 1.6
Samm50Q8BGH2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Gm10420-201ENSMUST00000121713 882 ntBASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Samm50Q8BGH2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Samm50Q8BGH2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Samm50Q8BGH2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Samm50Q8BGH2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Samm50Q8BGH2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Samm50Q8BGH2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms