Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ubp1Q811S7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubp1Q811S7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubp1Q811S7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubp1Q811S7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ubp1Q811S7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.22■□□□□ 0.99
Ubp1Q811S7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubp1Q811S7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubp1Q811S7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubp1Q811S7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubp1Q811S7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ubp1Q811S7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.21■□□□□ 0.99
Ubp1Q811S7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ubp1Q811S7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubp1Q811S7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubp1Q811S7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ubp1Q811S7 Gm22567-201ENSMUST00000175542 342 ntBASIC21.18■□□□□ 0.98
Ubp1Q811S7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.18■□□□□ 0.98
Ubp1Q811S7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ubp1Q811S7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubp1Q811S7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubp1Q811S7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubp1Q811S7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubp1Q811S7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubp1Q811S7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Ubp1Q811S7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubp1Q811S7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubp1Q811S7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.14■□□□□ 0.97
Ubp1Q811S7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ubp1Q811S7 Gm5921-201ENSMUST00000075898 882 ntBASIC21.14■□□□□ 0.97
Ubp1Q811S7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubp1Q811S7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubp1Q811S7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubp1Q811S7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.13■□□□□ 0.97
Ubp1Q811S7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ubp1Q811S7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ubp1Q811S7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ubp1Q811S7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.1■□□□□ 0.97
Ubp1Q811S7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms