Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim50Q810I2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim50Q810I2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Trim50Q810I2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.02■□□□□ 0.95
Trim50Q810I2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim50Q810I2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim50Q810I2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim50Q810I2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim50Q810I2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim50Q810I2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim50Q810I2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim50Q810I2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim50Q810I2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim50Q810I2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim50Q810I2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim50Q810I2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.98■□□□□ 0.95
Trim50Q810I2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim50Q810I2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Trim50Q810I2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim50Q810I2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Trim50Q810I2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim50Q810I2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim50Q810I2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim50Q810I2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim50Q810I2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim50Q810I2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.96■□□□□ 0.95
Trim50Q810I2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim50Q810I2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim50Q810I2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim50Q810I2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim50Q810I2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Trim50Q810I2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim50Q810I2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Trim50Q810I2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim50Q810I2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim50Q810I2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Trim50Q810I2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim50Q810I2 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.94■□□□□ 0.94
Trim50Q810I2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim50Q810I2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim50Q810I2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim50Q810I2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim50Q810I2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Trim50Q810I2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.93■□□□□ 0.94
Trim50Q810I2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim50Q810I2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.93■□□□□ 0.94
Trim50Q810I2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim50Q810I2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim50Q810I2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim50Q810I2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim50Q810I2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim50Q810I2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim50Q810I2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim50Q810I2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.91■□□□□ 0.94
Trim50Q810I2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trim50Q810I2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim50Q810I2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Trim50Q810I2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trim50Q810I2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Trim50Q810I2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim50Q810I2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trim50Q810I2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim50Q810I2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim50Q810I2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms