Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Shank2Q80Z38 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Shank2Q80Z38 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
Shank2Q80Z38 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC28.72■■■□□ 2.19
Shank2Q80Z38 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shank2Q80Z38 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Shank2Q80Z38 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shank2Q80Z38 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC28.72■■■□□ 2.19
Shank2Q80Z38 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shank2Q80Z38 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Shank2Q80Z38 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC28.71■■■□□ 2.19
Shank2Q80Z38 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Shank2Q80Z38 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
Shank2Q80Z38 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
Shank2Q80Z38 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Shank2Q80Z38 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC28.69■■■□□ 2.18
Shank2Q80Z38 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Shank2Q80Z38 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Shank2Q80Z38 Gm2011-201ENSMUST00000203124 1263 ntBASIC28.68■■■□□ 2.18
Shank2Q80Z38 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC28.68■■■□□ 2.18
Shank2Q80Z38 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shank2Q80Z38 Gm11847-201ENSMUST00000125165 1119 ntBASIC28.67■■■□□ 2.18
Shank2Q80Z38 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shank2Q80Z38 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC28.67■■■□□ 2.18
Shank2Q80Z38 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shank2Q80Z38 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shank2Q80Z38 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shank2Q80Z38 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.66■■■□□ 2.18
Shank2Q80Z38 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shank2Q80Z38 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shank2Q80Z38 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shank2Q80Z38 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Shank2Q80Z38 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shank2Q80Z38 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shank2Q80Z38 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shank2Q80Z38 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Shank2Q80Z38 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Shank2Q80Z38 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Shank2Q80Z38 Gm29257-201ENSMUST00000186115 639 ntBASIC28.62■■■□□ 2.17
Shank2Q80Z38 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Shank2Q80Z38 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shank2Q80Z38 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Shank2Q80Z38 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Shank2Q80Z38 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC28.61■■■□□ 2.17
Shank2Q80Z38 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shank2Q80Z38 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC28.61■■■□□ 2.17
Shank2Q80Z38 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Shank2Q80Z38 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shank2Q80Z38 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Shank2Q80Z38 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC28.6■■■□□ 2.17
Shank2Q80Z38 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Shank2Q80Z38 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC28.6■■■□□ 2.17
Shank2Q80Z38 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shank2Q80Z38 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Shank2Q80Z38 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shank2Q80Z38 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Shank2Q80Z38 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shank2Q80Z38 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.59■■■□□ 2.17
Shank2Q80Z38 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.59■■■□□ 2.17
Shank2Q80Z38 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Shank2Q80Z38 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC28.59■■■□□ 2.17
Shank2Q80Z38 Gm8093-201ENSMUST00000128935 1892 ntBASIC28.58■■■□□ 2.17
Shank2Q80Z38 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Shank2Q80Z38 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Shank2Q80Z38 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shank2Q80Z38 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC28.57■■■□□ 2.16
Shank2Q80Z38 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC28.57■■■□□ 2.16
Shank2Q80Z38 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Shank2Q80Z38 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Shank2Q80Z38 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shank2Q80Z38 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Shank2Q80Z38 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shank2Q80Z38 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shank2Q80Z38 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Shank2Q80Z38 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC28.54■■■□□ 2.16
Shank2Q80Z38 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.54■■■□□ 2.16
Shank2Q80Z38 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Shank2Q80Z38 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shank2Q80Z38 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Shank2Q80Z38 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC28.53■■■□□ 2.16
Shank2Q80Z38 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shank2Q80Z38 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shank2Q80Z38 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shank2Q80Z38 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shank2Q80Z38 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shank2Q80Z38 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shank2Q80Z38 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
Shank2Q80Z38 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Shank2Q80Z38 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Shank2Q80Z38 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
Shank2Q80Z38 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Shank2Q80Z38 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Shank2Q80Z38 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms