Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ush1gQ80T11 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ush1gQ80T11 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ush1gQ80T11 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ush1gQ80T11 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ush1gQ80T11 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ush1gQ80T11 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ush1gQ80T11 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ush1gQ80T11 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Ush1gQ80T11 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ush1gQ80T11 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.68■■□□□ 1.38
Ush1gQ80T11 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.67■■□□□ 1.38
Ush1gQ80T11 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ush1gQ80T11 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.67■■□□□ 1.38
Ush1gQ80T11 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ush1gQ80T11 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ush1gQ80T11 Gm7417-201ENSMUST00000192950 473 ntBASIC23.67■■□□□ 1.38
Ush1gQ80T11 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.67■■□□□ 1.38
Ush1gQ80T11 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ush1gQ80T11 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Ush1gQ80T11 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ush1gQ80T11 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ush1gQ80T11 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ush1gQ80T11 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
Ush1gQ80T11 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ush1gQ80T11 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ush1gQ80T11 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ush1gQ80T11 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ush1gQ80T11 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ush1gQ80T11 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ush1gQ80T11 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ush1gQ80T11 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.63■■□□□ 1.37
Ush1gQ80T11 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ush1gQ80T11 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ush1gQ80T11 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ush1gQ80T11 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ush1gQ80T11 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ush1gQ80T11 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.62■■□□□ 1.37
Ush1gQ80T11 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.62■■□□□ 1.37
Ush1gQ80T11 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ush1gQ80T11 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ush1gQ80T11 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.61■■□□□ 1.37
Ush1gQ80T11 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ush1gQ80T11 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ush1gQ80T11 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ush1gQ80T11 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.6■■□□□ 1.37
Ush1gQ80T11 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ush1gQ80T11 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Gm13241-201ENSMUST00000094493 780 ntBASIC23.59■■□□□ 1.37
Ush1gQ80T11 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ush1gQ80T11 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.58■■□□□ 1.37
Ush1gQ80T11 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ush1gQ80T11 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
Ush1gQ80T11 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ush1gQ80T11 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ush1gQ80T11 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ush1gQ80T11 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.57■■□□□ 1.36
Ush1gQ80T11 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ush1gQ80T11 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ush1gQ80T11 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ush1gQ80T11 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ush1gQ80T11 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ush1gQ80T11 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ush1gQ80T11 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ush1gQ80T11 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.54■■□□□ 1.36
Ush1gQ80T11 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ush1gQ80T11 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.54■■□□□ 1.36
Ush1gQ80T11 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms