Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Gm8093-201ENSMUST00000128935 1892 ntBASIC31.63■■■□□ 2.65
ShprhQ7TPQ3 Gm28731-201ENSMUST00000185564 1569 ntBASIC31.63■■■□□ 2.65
ShprhQ7TPQ3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ShprhQ7TPQ3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ShprhQ7TPQ3 Gm10399-202ENSMUST00000202768 748 ntBASIC31.6■■■□□ 2.65
ShprhQ7TPQ3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ShprhQ7TPQ3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ShprhQ7TPQ3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ShprhQ7TPQ3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ShprhQ7TPQ3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ShprhQ7TPQ3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
ShprhQ7TPQ3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
ShprhQ7TPQ3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
ShprhQ7TPQ3 Gm12922-201ENSMUST00000120626 809 ntBASIC31.57■■■□□ 2.65
ShprhQ7TPQ3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
ShprhQ7TPQ3 Gm9847-201ENSMUST00000052528 599 ntBASIC31.57■■■□□ 2.65
ShprhQ7TPQ3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ShprhQ7TPQ3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ShprhQ7TPQ3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
ShprhQ7TPQ3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
ShprhQ7TPQ3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
ShprhQ7TPQ3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.56■■■□□ 2.64
ShprhQ7TPQ3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC31.56■■■□□ 2.64
ShprhQ7TPQ3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ShprhQ7TPQ3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ShprhQ7TPQ3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ShprhQ7TPQ3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
ShprhQ7TPQ3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC31.55■■■□□ 2.64
ShprhQ7TPQ3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
ShprhQ7TPQ3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
ShprhQ7TPQ3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
ShprhQ7TPQ3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.54■■■□□ 2.64
ShprhQ7TPQ3 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.54■■■□□ 2.64
ShprhQ7TPQ3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
ShprhQ7TPQ3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.54■■■□□ 2.64
ShprhQ7TPQ3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
ShprhQ7TPQ3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ShprhQ7TPQ3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
ShprhQ7TPQ3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
ShprhQ7TPQ3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
ShprhQ7TPQ3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC31.53■■■□□ 2.64
ShprhQ7TPQ3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ShprhQ7TPQ3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ShprhQ7TPQ3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
ShprhQ7TPQ3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ShprhQ7TPQ3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
ShprhQ7TPQ3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
ShprhQ7TPQ3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
ShprhQ7TPQ3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.5■■■□□ 2.63
ShprhQ7TPQ3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ShprhQ7TPQ3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ShprhQ7TPQ3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ShprhQ7TPQ3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC31.49■■■□□ 2.63
ShprhQ7TPQ3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ShprhQ7TPQ3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC31.49■■■□□ 2.63
ShprhQ7TPQ3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ShprhQ7TPQ3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ShprhQ7TPQ3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ShprhQ7TPQ3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC31.48■■■□□ 2.63
ShprhQ7TPQ3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ShprhQ7TPQ3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
ShprhQ7TPQ3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.46■■■□□ 2.63
ShprhQ7TPQ3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ShprhQ7TPQ3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC31.45■■■□□ 2.63
ShprhQ7TPQ3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ShprhQ7TPQ3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.44■■■□□ 2.62
ShprhQ7TPQ3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ShprhQ7TPQ3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ShprhQ7TPQ3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ShprhQ7TPQ3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ShprhQ7TPQ3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ShprhQ7TPQ3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ShprhQ7TPQ3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ShprhQ7TPQ3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
ShprhQ7TPQ3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ShprhQ7TPQ3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ShprhQ7TPQ3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC31.41■■■□□ 2.62
ShprhQ7TPQ3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC31.41■■■□□ 2.62
ShprhQ7TPQ3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ShprhQ7TPQ3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ShprhQ7TPQ3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ShprhQ7TPQ3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC31.4■■■□□ 2.62
ShprhQ7TPQ3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ShprhQ7TPQ3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC31.39■■■□□ 2.62
ShprhQ7TPQ3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ShprhQ7TPQ3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ShprhQ7TPQ3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 Serp2-204ENSMUST00000228055 705 ntBASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ShprhQ7TPQ3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms