Protein–RNA interactions for Protein: Q6XAS4

Ssxb3, SSXB3 protein, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb3Q6XAS4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ssxb3Q6XAS4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssxb3Q6XAS4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssxb3Q6XAS4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssxb3Q6XAS4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ssxb3Q6XAS4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ssxb3Q6XAS4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ssxb3Q6XAS4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Ssxb3Q6XAS4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.39■■□□□ 1.02
Ssxb3Q6XAS4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.39■■□□□ 1.01
Ssxb3Q6XAS4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.38■■□□□ 1.01
Ssxb3Q6XAS4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ssxb3Q6XAS4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ssxb3Q6XAS4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.38■■□□□ 1.01
Ssxb3Q6XAS4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ssxb3Q6XAS4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ssxb3Q6XAS4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssxb3Q6XAS4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssxb3Q6XAS4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ssxb3Q6XAS4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssxb3Q6XAS4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ssxb3Q6XAS4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ssxb3Q6XAS4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssxb3Q6XAS4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ssxb3Q6XAS4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssxb3Q6XAS4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssxb3Q6XAS4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ssxb3Q6XAS4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ssxb3Q6XAS4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.33■■□□□ 1.01
Ssxb3Q6XAS4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.33■■□□□ 1
Ssxb3Q6XAS4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ssxb3Q6XAS4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
Ssxb3Q6XAS4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.31■■□□□ 1
Ssxb3Q6XAS4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ssxb3Q6XAS4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ssxb3Q6XAS4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ssxb3Q6XAS4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ssxb3Q6XAS4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssxb3Q6XAS4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ssxb3Q6XAS4 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms