Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.34■■□□□ 1.65
Scn10aQ6QIY3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Scn10aQ6QIY3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Scn10aQ6QIY3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Scn10aQ6QIY3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Scn10aQ6QIY3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Gm45417-201ENSMUST00000209533 758 ntBASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Scn10aQ6QIY3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scn10aQ6QIY3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scn10aQ6QIY3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scn10aQ6QIY3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Golgb1-201ENSMUST00000023534 498 ntBASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Scn10aQ6QIY3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scn10aQ6QIY3 Gm12821-201ENSMUST00000120022 600 ntBASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scn10aQ6QIY3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Scn10aQ6QIY3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Scn10aQ6QIY3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Scn10aQ6QIY3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Scn10aQ6QIY3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
Scn10aQ6QIY3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Scn10aQ6QIY3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Scn10aQ6QIY3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
Scn10aQ6QIY3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Scn10aQ6QIY3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Scn10aQ6QIY3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
Scn10aQ6QIY3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scn10aQ6QIY3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Scn10aQ6QIY3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Scn10aQ6QIY3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scn10aQ6QIY3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Scn10aQ6QIY3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Scn10aQ6QIY3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.15■■□□□ 1.62
Scn10aQ6QIY3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scn10aQ6QIY3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Scn10aQ6QIY3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Scn10aQ6QIY3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Scn10aQ6QIY3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Scn10aQ6QIY3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scn10aQ6QIY3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms