Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcd3Q6P9Z1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcd3Q6P9Z1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcd3Q6P9Z1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd3Q6P9Z1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd3Q6P9Z1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd3Q6P9Z1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd3Q6P9Z1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcd3Q6P9Z1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcd3Q6P9Z1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd3Q6P9Z1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd3Q6P9Z1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.69■□□□□ 0.74
Smarcd3Q6P9Z1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcd3Q6P9Z1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcd3Q6P9Z1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcd3Q6P9Z1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.66■□□□□ 0.74
Smarcd3Q6P9Z1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd3Q6P9Z1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd3Q6P9Z1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd3Q6P9Z1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcd3Q6P9Z1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcd3Q6P9Z1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcd3Q6P9Z1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcd3Q6P9Z1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd3Q6P9Z1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd3Q6P9Z1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcd3Q6P9Z1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Gm6311-201ENSMUST00000073790 878 ntBASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Smarcd3Q6P9Z1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.62■□□□□ 0.73
Smarcd3Q6P9Z1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcd3Q6P9Z1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarcd3Q6P9Z1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms