Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.94■□□□□ 0.46
Commd3Q63829 Notumos-201ENSMUST00000151998 2659 ntBASIC17.94■□□□□ 0.46
Commd3Q63829 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Commd3Q63829 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.93■□□□□ 0.46
Commd3Q63829 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Commd3Q63829 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Commd3Q63829 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Commd3Q63829 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Commd3Q63829 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Commd3Q63829 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Commd3Q63829 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Commd3Q63829 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Commd3Q63829 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Commd3Q63829 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Commd3Q63829 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Commd3Q63829 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Commd3Q63829 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Commd3Q63829 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Commd3Q63829 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Commd3Q63829 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.91■□□□□ 0.46
Commd3Q63829 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Commd3Q63829 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Commd3Q63829 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Commd3Q63829 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Commd3Q63829 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Commd3Q63829 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Commd3Q63829 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Commd3Q63829 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Commd3Q63829 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Commd3Q63829 Gm37136-201ENSMUST00000194368 194 ntBASIC17.89■□□□□ 0.45
Commd3Q63829 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Commd3Q63829 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Commd3Q63829 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Commd3Q63829 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Commd3Q63829 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Commd3Q63829 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.88■□□□□ 0.45
Commd3Q63829 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Commd3Q63829 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Commd3Q63829 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Commd3Q63829 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Commd3Q63829 Gm45855-201ENSMUST00000212546 880 ntBASIC17.87■□□□□ 0.45
Commd3Q63829 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.87■□□□□ 0.45
Commd3Q63829 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Commd3Q63829 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Commd3Q63829 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
Commd3Q63829 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.86■□□□□ 0.45
Commd3Q63829 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.86■□□□□ 0.45
Commd3Q63829 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Commd3Q63829 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.86■□□□□ 0.45
Commd3Q63829 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Commd3Q63829 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.85■□□□□ 0.45
Commd3Q63829 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Commd3Q63829 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Commd3Q63829 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Commd3Q63829 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Commd3Q63829 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Commd3Q63829 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Commd3Q63829 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Commd3Q63829 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.84■□□□□ 0.45
Commd3Q63829 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Commd3Q63829 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Commd3Q63829 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Commd3Q63829 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Commd3Q63829 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.84■□□□□ 0.45
Commd3Q63829 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.84■□□□□ 0.45
Commd3Q63829 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.83■□□□□ 0.45
Commd3Q63829 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Commd3Q63829 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Commd3Q63829 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Commd3Q63829 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Commd3Q63829 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Commd3Q63829 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Commd3Q63829 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Commd3Q63829 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Commd3Q63829 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Commd3Q63829 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Commd3Q63829 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Commd3Q63829 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Commd3Q63829 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Commd3Q63829 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.81■□□□□ 0.44
Commd3Q63829 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Commd3Q63829 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.81■□□□□ 0.44
Commd3Q63829 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Commd3Q63829 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Commd3Q63829 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Commd3Q63829 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Commd3Q63829 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Commd3Q63829 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Commd3Q63829 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms