Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sdf4Q61112 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sdf4Q61112 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sdf4Q61112 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Sdf4Q61112 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Sdf4Q61112 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sdf4Q61112 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sdf4Q61112 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sdf4Q61112 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Sdf4Q61112 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sdf4Q61112 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sdf4Q61112 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sdf4Q61112 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Sdf4Q61112 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sdf4Q61112 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sdf4Q61112 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sdf4Q61112 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Sdf4Q61112 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sdf4Q61112 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Sdf4Q61112 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sdf4Q61112 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sdf4Q61112 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sdf4Q61112 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.85■■□□□ 1.09
Sdf4Q61112 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sdf4Q61112 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Sdf4Q61112 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sdf4Q61112 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sdf4Q61112 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sdf4Q61112 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sdf4Q61112 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.84■■□□□ 1.09
Sdf4Q61112 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.84■■□□□ 1.09
Sdf4Q61112 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sdf4Q61112 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sdf4Q61112 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sdf4Q61112 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sdf4Q61112 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sdf4Q61112 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.83■■□□□ 1.09
Sdf4Q61112 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sdf4Q61112 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sdf4Q61112 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.83■■□□□ 1.08
Sdf4Q61112 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Sdf4Q61112 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
Sdf4Q61112 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sdf4Q61112 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Sdf4Q61112 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Sdf4Q61112 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.81■■□□□ 1.08
Sdf4Q61112 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.81■■□□□ 1.08
Sdf4Q61112 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sdf4Q61112 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.81■■□□□ 1.08
Sdf4Q61112 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sdf4Q61112 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sdf4Q61112 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sdf4Q61112 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.8■■□□□ 1.08
Sdf4Q61112 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sdf4Q61112 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.8■■□□□ 1.08
Sdf4Q61112 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.79■■□□□ 1.08
Sdf4Q61112 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Sdf4Q61112 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sdf4Q61112 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sdf4Q61112 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sdf4Q61112 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sdf4Q61112 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sdf4Q61112 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sdf4Q61112 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.78■■□□□ 1.08
Sdf4Q61112 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sdf4Q61112 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sdf4Q61112 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sdf4Q61112 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sdf4Q61112 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sdf4Q61112 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sdf4Q61112 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sdf4Q61112 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sdf4Q61112 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sdf4Q61112 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sdf4Q61112 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Sdf4Q61112 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms