Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ripk1Q60855 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ripk1Q60855 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ripk1Q60855 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ripk1Q60855 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.31■□□□□ 0.84
Ripk1Q60855 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ripk1Q60855 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ripk1Q60855 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ripk1Q60855 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ripk1Q60855 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ripk1Q60855 Gm14523-201ENSMUST00000117260 558 ntBASIC20.3■□□□□ 0.84
Ripk1Q60855 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.3■□□□□ 0.84
Ripk1Q60855 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ripk1Q60855 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ripk1Q60855 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ripk1Q60855 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ripk1Q60855 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ripk1Q60855 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ripk1Q60855 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.28■□□□□ 0.84
Ripk1Q60855 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.28■□□□□ 0.84
Ripk1Q60855 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.28■□□□□ 0.84
Ripk1Q60855 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ripk1Q60855 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ripk1Q60855 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ripk1Q60855 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ripk1Q60855 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ripk1Q60855 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ripk1Q60855 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.27■□□□□ 0.84
Ripk1Q60855 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ripk1Q60855 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ripk1Q60855 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.27■□□□□ 0.84
Ripk1Q60855 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.27■□□□□ 0.84
Ripk1Q60855 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ripk1Q60855 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ripk1Q60855 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ripk1Q60855 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ripk1Q60855 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ripk1Q60855 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ripk1Q60855 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ripk1Q60855 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Ripk1Q60855 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Ripk1Q60855 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ripk1Q60855 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ripk1Q60855 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ripk1Q60855 Gm7332-201ENSMUST00000118351 454 ntBASIC20.25■□□□□ 0.83
Ripk1Q60855 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.25■□□□□ 0.83
Ripk1Q60855 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ripk1Q60855 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.25■□□□□ 0.83
Ripk1Q60855 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ripk1Q60855 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ripk1Q60855 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.24■□□□□ 0.83
Ripk1Q60855 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.24■□□□□ 0.83
Ripk1Q60855 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ripk1Q60855 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ripk1Q60855 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ripk1Q60855 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ripk1Q60855 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ripk1Q60855 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk1Q60855 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk1Q60855 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk1Q60855 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.23■□□□□ 0.83
Ripk1Q60855 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk1Q60855 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk1Q60855 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ripk1Q60855 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk1Q60855 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ripk1Q60855 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk1Q60855 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk1Q60855 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Ripk1Q60855 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk1Q60855 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk1Q60855 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.22■□□□□ 0.83
Ripk1Q60855 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ripk1Q60855 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.21■□□□□ 0.83
Ripk1Q60855 Gm12366-201ENSMUST00000121722 873 ntBASIC20.21■□□□□ 0.83
Ripk1Q60855 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.21■□□□□ 0.83
Ripk1Q60855 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.21■□□□□ 0.83
Ripk1Q60855 Gm5786-201ENSMUST00000085368 882 ntBASIC20.21■□□□□ 0.83
Ripk1Q60855 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.21■□□□□ 0.83
Ripk1Q60855 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ripk1Q60855 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.2■□□□□ 0.82
Ripk1Q60855 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.2■□□□□ 0.82
Ripk1Q60855 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Ripk1Q60855 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ripk1Q60855 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ripk1Q60855 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms