Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClpbQ60649 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClpbQ60649 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClpbQ60649 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
ClpbQ60649 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClpbQ60649 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.66■□□□□ 0.9
ClpbQ60649 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpbQ60649 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ClpbQ60649 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.65■□□□□ 0.9
ClpbQ60649 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.65■□□□□ 0.9
ClpbQ60649 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpbQ60649 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ClpbQ60649 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.64■□□□□ 0.9
ClpbQ60649 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ClpbQ60649 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ClpbQ60649 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpbQ60649 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpbQ60649 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.63■□□□□ 0.89
ClpbQ60649 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ClpbQ60649 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpbQ60649 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpbQ60649 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.62■□□□□ 0.89
ClpbQ60649 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ClpbQ60649 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ClpbQ60649 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ClpbQ60649 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ClpbQ60649 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ClpbQ60649 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ClpbQ60649 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
ClpbQ60649 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ClpbQ60649 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClpbQ60649 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClpbQ60649 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.6■□□□□ 0.89
ClpbQ60649 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClpbQ60649 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClpbQ60649 Gm5921-201ENSMUST00000075898 882 ntBASIC20.6■□□□□ 0.89
ClpbQ60649 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ClpbQ60649 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.6■□□□□ 0.89
ClpbQ60649 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClpbQ60649 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClpbQ60649 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
ClpbQ60649 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClpbQ60649 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ClpbQ60649 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ClpbQ60649 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ClpbQ60649 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClpbQ60649 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ClpbQ60649 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClpbQ60649 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClpbQ60649 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClpbQ60649 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ClpbQ60649 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ClpbQ60649 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ClpbQ60649 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ClpbQ60649 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ClpbQ60649 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ClpbQ60649 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ClpbQ60649 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClpbQ60649 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClpbQ60649 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClpbQ60649 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ClpbQ60649 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ClpbQ60649 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ClpbQ60649 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ClpbQ60649 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClpbQ60649 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.56■□□□□ 0.88
ClpbQ60649 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.56■□□□□ 0.88
ClpbQ60649 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.56■□□□□ 0.88
ClpbQ60649 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ClpbQ60649 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ClpbQ60649 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ClpbQ60649 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ClpbQ60649 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClpbQ60649 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ClpbQ60649 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ClpbQ60649 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClpbQ60649 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClpbQ60649 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ClpbQ60649 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ClpbQ60649 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.54■□□□□ 0.88
ClpbQ60649 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.53■□□□□ 0.88
ClpbQ60649 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ClpbQ60649 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Gm22567-201ENSMUST00000175542 342 ntBASIC20.53■□□□□ 0.88
ClpbQ60649 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ClpbQ60649 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClpbQ60649 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms