Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h4Q60641 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nr1h4Q60641 Gm7432-201ENSMUST00000210343 879 ntBASIC20.52■□□□□ 0.88
Nr1h4Q60641 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.52■□□□□ 0.88
Nr1h4Q60641 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.52■□□□□ 0.87
Nr1h4Q60641 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nr1h4Q60641 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h4Q60641 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h4Q60641 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nr1h4Q60641 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h4Q60641 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Nr1h4Q60641 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h4Q60641 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nr1h4Q60641 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nr1h4Q60641 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nr1h4Q60641 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h4Q60641 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nr1h4Q60641 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h4Q60641 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h4Q60641 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nr1h4Q60641 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.48■□□□□ 0.87
Nr1h4Q60641 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.48■□□□□ 0.87
Nr1h4Q60641 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h4Q60641 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h4Q60641 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nr1h4Q60641 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nr1h4Q60641 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nr1h4Q60641 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h4Q60641 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h4Q60641 Gm11599-201ENSMUST00000118720 878 ntBASIC20.46■□□□□ 0.87
Nr1h4Q60641 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.46■□□□□ 0.87
Nr1h4Q60641 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h4Q60641 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nr1h4Q60641 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.45■□□□□ 0.86
Nr1h4Q60641 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nr1h4Q60641 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.44■□□□□ 0.86
Nr1h4Q60641 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h4Q60641 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h4Q60641 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.44■□□□□ 0.86
Nr1h4Q60641 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nr1h4Q60641 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nr1h4Q60641 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nr1h4Q60641 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h4Q60641 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h4Q60641 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h4Q60641 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h4Q60641 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nr1h4Q60641 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.42■□□□□ 0.86
Nr1h4Q60641 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nr1h4Q60641 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nr1h4Q60641 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.41■□□□□ 0.86
Nr1h4Q60641 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nr1h4Q60641 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.4■□□□□ 0.86
Nr1h4Q60641 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nr1h4Q60641 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Nr1h4Q60641 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nr1h4Q60641 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h4Q60641 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h4Q60641 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h4Q60641 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h4Q60641 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nr1h4Q60641 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.38■□□□□ 0.85
Nr1h4Q60641 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms