Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Xrcc1Q60596 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Xrcc1Q60596 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Xrcc1Q60596 Gm13238-201ENSMUST00000117655 780 ntBASIC20.65■□□□□ 0.9
Xrcc1Q60596 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.65■□□□□ 0.9
Xrcc1Q60596 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Xrcc1Q60596 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Xrcc1Q60596 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Xrcc1Q60596 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Xrcc1Q60596 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Xrcc1Q60596 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Xrcc1Q60596 Gm45444-201ENSMUST00000211394 898 ntBASIC20.64■□□□□ 0.89
Xrcc1Q60596 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Xrcc1Q60596 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc1Q60596 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Xrcc1Q60596 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Xrcc1Q60596 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrcc1Q60596 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Gm43566-201ENSMUST00000196851 808 ntBASIC20.6■□□□□ 0.89
Xrcc1Q60596 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrcc1Q60596 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Xrcc1Q60596 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrcc1Q60596 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrcc1Q60596 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Xrcc1Q60596 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xrcc1Q60596 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc1Q60596 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Xrcc1Q60596 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrcc1Q60596 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Xrcc1Q60596 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrcc1Q60596 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.56■□□□□ 0.88
Xrcc1Q60596 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.56■□□□□ 0.88
Xrcc1Q60596 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.55■□□□□ 0.88
Xrcc1Q60596 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc1Q60596 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Xrcc1Q60596 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrcc1Q60596 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrcc1Q60596 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.54■□□□□ 0.88
Xrcc1Q60596 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrcc1Q60596 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xrcc1Q60596 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Xrcc1Q60596 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xrcc1Q60596 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xrcc1Q60596 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Xrcc1Q60596 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Xrcc1Q60596 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.52■□□□□ 0.88
Xrcc1Q60596 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrcc1Q60596 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Xrcc1Q60596 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Xrcc1Q60596 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Xrcc1Q60596 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrcc1Q60596 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrcc1Q60596 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrcc1Q60596 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrcc1Q60596 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Xrcc1Q60596 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrcc1Q60596 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Xrcc1Q60596 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Xrcc1Q60596 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Xrcc1Q60596 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms