Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk2Q5S006 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrrk2Q5S006 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk2Q5S006 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrrk2Q5S006 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrrk2Q5S006 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrk2Q5S006 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrk2Q5S006 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrk2Q5S006 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lrrk2Q5S006 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrk2Q5S006 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.39■□□□□ 0.69
Lrrk2Q5S006 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Gm27011-201ENSMUST00000182352 972 ntBASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrk2Q5S006 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lrrk2Q5S006 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrk2Q5S006 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.37■□□□□ 0.69
Lrrk2Q5S006 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrk2Q5S006 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrk2Q5S006 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lrrk2Q5S006 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrk2Q5S006 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrk2Q5S006 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrk2Q5S006 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrk2Q5S006 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrk2Q5S006 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrk2Q5S006 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrk2Q5S006 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrk2Q5S006 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.34■□□□□ 0.69
Lrrk2Q5S006 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrk2Q5S006 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrk2Q5S006 Gm10849-201ENSMUST00000100397 618 ntBASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrk2Q5S006 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.33■□□□□ 0.68
Lrrk2Q5S006 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Lrrk2Q5S006 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.32■□□□□ 0.68
Lrrk2Q5S006 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrk2Q5S006 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrk2Q5S006 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrk2Q5S006 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrk2Q5S006 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrk2Q5S006 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Lrrk2Q5S006 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrk2Q5S006 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrk2Q5S006 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrk2Q5S006 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lrrk2Q5S006 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrk2Q5S006 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrk2Q5S006 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.28■□□□□ 0.68
Lrrk2Q5S006 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms